Progress report from the Biesecker Lab at NIH

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It  was  great  to  see  so  many  of  you  involved  in  the  PSFs  at  the  US  and  UK  meetings this fall!   Congratulations to Kim, Tracey, and all the hard-­‐working  and dedicated PSF Board Members for putting on two great events!

As those of you who attended the meetings or watched the talks on-­line (see link below) may know, all of us in the NIH Proteus group are very excited about new avenues of research that have opened to us since we identified the genetic cause of Proteus syndrome.  We are very hopeful that this discovery will improve our understanding of why patients with Proteus syndrome have overgrowth and that this knowledge may lead to better treatments for the condition.

Dr. Biesecker and Julie Sapp recently met with a drug company to start talking about a possible drug treatment for Proteus syndrome.   Because of confidentiality agreements, we cannot share lots of concrete details at this time, but we left the meeting  quite  encouraged  about  the  potential  to  start  a  trial  of  a  new  drug  in patients with Proteus syndrome and we are optimistic that this trial could have promising results.

One  thing  that  we  talked  about  at  the  PSF  meetings  was  how  the  research  here  at NIH could evolve as we orient ourselves around the goal of trying new treatments for Proteus syndrome.  There are still many experiments we need to do and many procedures we need to put in place before we can start seeing patients as part of a drug trial, but we are working very hard on these problems and hope that we can provide more information soon.  In the meantime, it is a great idea to be sure that Kim and/or Tracey have up-­‐to-­‐date contact information for your family so that they can keep in touch with you about our progress.  As well, an important goal for the foundations is to help identify as many patients as possible who might be eligible for the next phase of the research.  It is often said that there is emotional power in numbers,  but  in  this  case  it  is  emotional  and  scientific  power  that  we  need  to generate!

Thank  you  again  to  the  PSF  Board  and  Membership  for  a  great  set  of  meetings  and for all you do to partner with us in our research!

http://www.youtube.com/user/GenomeTV#g/c/0DDE1062F45B0D7E

 

Video coverage of PSF conference in USA

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Dear all

Jordan and I attended the Proteus conference in USA last weekend (8th Oct). We were very lucky to have volunteers to both record and edit the footage.

This means you can listen to all the speakers in the comfort of your own home!

There are talks by Les Biesecker, Dr Michael Cohen, Laura Tosi (orthopaedic surgeon), Barbara Biesecker (genetic counsellor), Tom Darling (dermatology) and also by individuals affected by Proteus. You can hear first hand about the research and the way forward.

I hope you enjoy watching and listening. Our videographer offers her apologies that there may be some places in the video that are not perfect but hopes it is a wonderful experience for all.

Enjoy!

Tracey

When you open the site below, look on the right of the home page and select each topic individually when you are ready to listen and watch.

To view and download, go to:
http://www.youtube.com/user/GenomeTV#p/c/0DDE1062F45B0D7E

NEWSFLASH!

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Dr. Biesecker is now in communication with pharmaceutical research companies to develop and test drugs that may be useful for patients with Proteus Syndrome.

UK medical and family conference 24/25 September 2011

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UK medical and family conference 24/25 September 2011 – attended by Dr Leslie Biesecker and Julie Sapp from NIH

Contact Tracey whitewood-Neal for more information – traceywhitewoodneal@yahoo.co.uk

The cause of Proteus Syndrome has been discovered!

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Groundbreaking News!

Bethesda, Md., Wed., July 27, 2011 — A team of researchers has identified the genetic mutation that causes Proteus syndrome, a rare disorder in which tissue and bone grows massively out of proportion. The discovery, which has implications for potential drug therapies and even cancer, appears in the July 27, 2011, early online edition of The New England Journal of Medicine. The team was led by researchers at the National Human Genome Research Institute (NHGRI), part of the National Institutes of Health.

Proteus syndrome gained wide public attention in 1980, through the movie “The Elephant Man,” about a man depicted as having the disease. Researchers found that a point mutation — a single-letter misspelling in the DNA of the genetic code — in the AKT1 gene activates the sporadic tissue growth characteristic of Proteus syndrome. Physicians named the condition for the Greek god who could transform his shape. There are fewer than 500 people with the disease in the developed world, where it can be tracked.

Unlike inherited disease-causing mutations, the gene variant that triggers Proteus occurs spontaneously in each affected individual during embryonic development. The severity of the disease depends on the timing during embryonic development that the genetic mistake occurs in a single cell and in which part of the developing organism. Only the cells that descend from the cell with the original AKT1 gene mutation display the hallmarks of the disease, leaving the individual with a mixture of normal and mutated cells.

The affected newborn appears normal, but symptoms arise in the child’s first two years. The mutation in AKT1 alters the ability of affected cells to regulate their own growth, leading some parts of the patient’s body to grow to abnormal and even enormous sizes, while other parts of the body remain normal. The irregular overgrowth worsens with age and increases the susceptibility to tumors.

“This study resolves a daunting challenge in clinical genetics and offers hope for patients with Proteus syndrome,” said NHGRI Director Eric D. Green, M.D., Ph.D. “This rare disorder has been the focus of curiosity and medical observation for decades but until now has never been biologically explained. With the analysis reported here, patients and families who face this condition have hope for future therapies.”

As follow up to the current study, NHGRI researchers plan to test DNA from the skeleton of Joseph Merrick to determine whether Proteus syndrome caused his dramatic disfigurement. Merrick gained celebrity — and for a time earned his livelihood in England and Europe — by being displayed in human novelty exhibitions as the Elephant Man. He died in 1890 at the age of 27 in London Hospital, now the Royal London Hospital, where he resided at the end of his life. The hospital preserved his skeleton in its pathology collection, providing modern researchers a chance to test his century old DNA.  Merrick’s life has been portrayed on stage, and in a 1980 Hollywood movie titled “The Elephant Man.”

Diagnosing Merrick will be no simple study.  Because of the way the mutation occurs during embryonic development, the NHGRI-led team found that the gene variant of Proteus syndrome occurs in only a subset of the body’s cells rather than in every cell, a condition called genetic mosaicism. There are only a small number of known mosaic disorders in which an individual’s cells have a different genetic composition from one another. Essentially, the person develops more than one genome. Since only a subset of the body’s cells harbor the mutation, it is possible that during a medical biopsy, in which bits of tissue are cut out for analysis, the diagnosis may be missed because only normal cells are sampled.

“Diagnosis in our patients has been really difficult,” said senior author Leslie Biesecker, M.D., chief of NHGRI’s Genetic Diseases Research Branch. “This molecular discovery gives us a basis for objective molecular diagnosis for patients with perplexing forms of overgrowth.”

Until now, clinical diagnosis has been based on observation of patient features. Besides overgrowth of limbs, the condition is characterized by a variety of skin lesions and thickening of the soles of the feet. Some patients have neurological complications, such as mental retardation, seizures and vision loss.

To find the single-letter misspelling among the 3 billion letters that make up the human genome, the researchers performed whole-exome sequencing on the DNA of seven patients with Proteus syndrome. Whole-exome sequencing determines the sequence of letters that make up the 1 to 2 percent of the genome that contains protein-coding genes. The research team then analyzed more than 20 additional affected individuals, finding the same gene variant in DNA in more than 90 percent of these individuals. The team suspects that the three individuals so far negative for the mutation may actually have the mutation at low levels or in different tissues than those sampled in the initial biopsy. By contrast, the variant is never found in unaffected people, including a random study population of more than 400 individuals and in thousands of DNA sequences maintained in public genome research databases.

The mutated gene, AKT1, is an oncogene, meaning that it can promote the kind of uncontrolled cell growth associated with cancer. The variant of AKT1 that causes Proteus syndrome is part of a cascade of mutations that also promotes metastasis, the process by which cancer cells spread to healthy parts of the body. AKT1 mutations have been detected in about two percent of cancer samples.

In cancer, an AKT1 mutation develops as part of a chain of mutation events that occurs in a limited number of normal cells of a particular organ of the body. In Proteus syndrome, because the mutation occurs in embryonic development, many more tissues of the body are impacted by the gene variant, though not all have overgrowth. According to Dr. Biesecker, a person could not survive if the variant that causes Proteus syndrome occurred so early as to be in all cells of the body.

Previous research demonstrated that the AKT1 mutation changes the cell growth-promoting activity of the AKT protein. NHGRI researchers found that cells from patients with Proteus syndrome had increased AKT activity at times when AKT would normally be inactive in unaffected individuals. The mutation acts like an accelerator of cell growth, but only in some tissues of the body.

To study the mosaicism affect of Proteus syndrome, the researchers tested cells derived from affected tissue and unaffected tissue of individuals with the disease. They analyzed the level of activation of AKT, confirming that affected tissue had increased AKT protein activity.

“We now have a better chance of making or finding a drug that can arrest this overgrowth and begin to use it early on in the disease progression,” Dr. Biesecker said. “A factor in our favor is that it is much easier to find a drug that inhibits the activity of a protein, which is what we want to do with AKT in Proteus syndrome, than to activate a protein.”

In the cancer field, there are a number of potential therapeutics being developed to inhibit the pathway involving this gene, some of them by inhibiting AKT1 itself. “For Proteus syndrome, AKT1 will likely need to be targeted for optimal benefit to affected patients,” Dr. Biesecker said.

The researchers further demonstrated that tissue biopsies are required to genetically diagnose Proteus syndrome, since the variant that causes the AKT1 mutation is infrequently present in white blood cells typically sampled for genome analysis.

“During the past 15 years, Proteus syndrome patients have come to the NIH Clinical Center, where we have operated to help stop bones from overgrowing,” Dr. Biesecker said. “Our tissue bank has grown during this period because we have been able to obtained samples of affected tissue during surgeries that we would otherwise not have had for this study. If we just asked pediatricians to mail to us blood samples of children with Proteus syndrome we would not have found the mutation. The NIH Clinical Center was essential in providing support and expert colleagues to allow us to do this research.”

In addition to patients seen at NIH, the study included the efforts of collaborators from eight community hospitals and five university medical centers in four countries. Contributors to the study also included investigators from the NIH Intramural Sequencing Center, administered by NHGRI, and from the National Cancer Institute and the National Institute of Dental and Craniofacial Research. In addition to the hospitals and medical centers, the study authors also included representatives from two independent research groups and the Proteus Syndrome Foundations of the United States and the United Kingdom.

NHGRI is one of the 27 institutes and centers at the NIH, an agency of the Department of Health and Human Services. The NHGRI Division of Intramural Research develops and implements technology to understand, diagnose and treat genomic and genetic diseases. Additional information about NHGRI can be found at its website at www.genome.gov.

The National Institutes of Health – “The Nation’s Medical Research Agency” – includes 27 institutes and centers, and is a component of the U.S. Department of Health and Human Services. It is the primary federal agency for conducting and supporting basic, clinical and translational medical research, and it investigates the causes, treatments, and cures for both common and rare diseases. For more, visit www.nih.gov.

For more information visit: http://www.genome.gov/proteus/

 

News reports

http://health.usnews.com/health-news/family-health/cancer/articles/2011/07/27/scientists-id-gene-linked-to-syndrome-behind-elephant-man-disease

 

Updates from the Biesecker Lab at NIH

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It’s been a busy year here at NIH and we have several exciting projects to update the PSF about.

  • We have been invited to submit the proceedings from the Orthopedic Conference that the PSF supported in 2007 to an international orthopedics journal. As many of you know, we have directly applied some of what we learned at that conference to many of our patients. The advance we are most excited about is the use of guided-growth orthopedic hardware (“8-plates”) to reduce the overgrowth of limbs, reducing leg-length discrepancies. We are very grateful to all the patients who donated tissue samples from surgery – these samples allow us to do our research!
  • Dr. Marjorie Lindhurst is one of the people who most patients never meet, but her hard work in our lab is vital to our mission. Recently, Dr. Lindhurst has been working to try to find a way to tell “Proteus” cells apart from “normal” cells. This is essential because we need to be sure that we are doing our research on cells that have Proteus syndrome, not normal cells. This “Proteus signature” will also allow us to make more accurate diagnosese and distinguish Proteus syndrome from other similar conditions. Some of Dr. Lindhurst’s preliminary findings are shown below: The picture on the left shows cells from the cerebriform connective tissue nevus (CCTN) in a Proteus patient, while the picture on the right shows cells from a patch of normal skin from the same patient. You can see how the cells from the CCTN “light up” differently from the normal cells.

  • Finally, we are very excited about a brand-new technology that the generous grant from the PSF has allowed us to use – whole exome sequencing.  When we talk with parents about how we do not yet know which gene causes Proteus syndrome, many of you ask us: “Why can’t you look through all of the genes and find the cause that way?”  We are now able to do exactly that, which is what “whole exome sequencing” means.  Using this new technology, we will look through all the genes of several patients with Proteus syndrome (along with their parents’ genes) and we hope that this will help us find the cause of this condition.  Each test costs about $2500 per person, so the PSF grant is a huge financial help – thank you!

Jordan gets back to normal

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Jordan is doing well and has started back at his Saturday morning job at the local greengrocers.

Last week he had his work experience at our local council – they let him write a blog on their website.

http://www.next-wave.org.uk/index.cfm?articleid=6887

Jordan completes his rehab

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Well Jordan completed his rehab for his “longer legs” with knees and feet in just one week!  He can now walk with a stick or with a walking frame and has even had a go on a treadmill!

Of course he had to go shopping for new jeans, new trousers and school shoes!!!!!!!!

Jordan has done exceptionally well and is very pleased to now be slightly taller than me (I am 5 foot 3 inches) and his physio Jennifer!

Huge thanks to his physio therapist Jennifer and prosthetist Emma at RNOH. Clive for the wonderfully finished shaped legs! Also to everyone at RNOH, Mr Calder and his team, Dr Cooper, ITU, the play specialists Michelle and Zoe, the teachers (Gail, Hilary, Chez and team), Liz from the pain team, Coxen and ADU staff and everyone else who made our stays over the past few months more bearable!  Also to Anna for her help with the filming last week.  I haven’t mentioned everyone but take this as my personal thank you to everyone we have come across at the RNOH!  There will be no stopping you when that new hospital gets built!

Thanks also to family, friends and colleagues who have been there every step of the way.

Jordan has completed his journey! Everyone has played a part. THANK YOU!

Jordans first walk on his longer legs

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Jordan was fitted for his longer legs last week and took to them straight away! The video shows his first walk in them and with his first pair of shoes! We are back to RNOH w/c 7th June to start his second lot of rehab.

Thanks to everyone for their continued support.

Dean, Tracey, Jordan and Kai xx

Jordan’s in ‘training’

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Jordan is being fitted for his longer legs (with knees and feet) on 1st June 2010 with rehab starting on 7th June at the RNOH Stanmore. Jordan is very excited and is now able to go out a buy a pair of trainers!  He has no shortage of people wanting to buy him shoes that’s for sure!

Jordan has been keeping us his weight training twice a week at our local gym and is feeling really good, hardly any phantom pain and he does not get cold like he used to when he had his legs.

He went to see Chelsea recently with Colin and Adam and had a fantastic time as you see from the photo!

Will post some photos of the rehab as soon as I can

Thanks to everyone for their continued support

Dean, Tracey, Jordan and Kai
xx



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